Note: This web site is only kept up to date for OSG Software 1.2 (VDT 2.0.0). If you are looking for information for the most recent release, the RPM-based OSG Software 3.0, please see the OSG documentation web site

Patches for software in the VDT

When we build software for the VDT, we patch Globus and Apache.

Building Globus for VDT 1.10.1

To build Globus for VDT 1.10.1, we check out Globus 4.0 using the globus_4_0_8 tag then we apply the patches that follow. If you like, you can look at the source code after it has been patched.

For those who are interested, you can see the exact build script that we use to build VDT 1.8.1. This script is meant to be run in the Metronome build and test software, so it will NOT run out of the box for you. That said, you might still find it useful to understand how we do the build.
Download build script

You can download the tarball with the complete set of patches here.

Patches for VDT 1.10.1

Name Description Diff Ticket
011__gss_assist_gridmap Enhancement by EDG/LCG: "gridmapdir" functions allow a pool of pre-created anonymous accounts to be mapped to real users (DNs) at run-time, without further intervention by a sysadmin. The functionality is disabled and does not affect any installations unless the environment variable GRIDMAPDIR points to a directory that has been initialized with the anonymous accounts (/etc/grid-security/gridmapdir). diff N/A
013__job_manager_acct Accounting log for job management diff Bugzilla 1538
014__gatekeeper_acct Log rotation & job accounting diff Bugzilla 1538
017__lsf_acct.diff Log rotation & job accounting diff
018__script-lsf-queue Change LSF monitoring to allow job accounting to work for failed jobs. diff Bugzilla 1538
019__find-lsf-tools Find bacct for LSF tools, needed for accounting diff Bugzilla 1538
026__gram_protocol_io Fix a file descriptor leak and a potential deadlock in GRAM diff Bugzilla 1546
028__gram_job_manager_script Fix job race state condition in the GRAM job manager. diff Bugzilla 1548
036__gram_job_manager_query Patch for race condition in job manager diff Bugzilla 1550
037__gram_job_manager_state Patch for race condition in job manager diff Bugzilla 1551
041__jobmanager_syslog diff
065__prewsgram_multi_condor_log.diff Make pre-web GRAM use one log file per Condor job instead of one large log file that can't be rotated. diff
Bugzilla 4199
066__disable_streaming.diff Allow system administrators to disable streaming output in pre-ws gram by passing -disable-streaming to the jobmanager (in $GLOBUS_LOCATION/etc/globus-job-manager.conf diff
Bugzilla 4213
072__no-gram-reporter.diff Disable the GRAM reporter in the slapd.conf. It's not used normally, and including it causes MDS 2 failures. diff
078__gram_jobmanager_filter.diff Optionally filter gram jobs based on executable name diff Bugzilla 4718
088__gram_condor_gratia_patch.diff Inform Gratia of completed job, if Gratia is in use.. diff
089__teragrid-pbs-fixes.diff Improvements to the PBS job manager made by TeraGrid. diff
096__condor_in_x509_proxy.diff Tell Condor to forward the user's X509 proxy certificate to the job diff
097__osg_grid_globus_location.diff In an OSG installation, set a job's GLOBUS_LOCATION based on the OSG_GRID environment variable. This will not affect a non-OSG installation. diff
099__gatekeeper_fork.diff Add configuration knob to gatekeeper to control where it forks before starting a jobmanager. This allows admins to use xinetd to limit the number of running jobmanagers. By default, Globus's behavior has not been changed, but will only change if the configuration is changed. diff
103__gatekeeper_act.diff Rearrange gatekeeper accounting to facilitate interaction with LCAS/LCMAPS diff (VDT ticket 2879)
106__jm_grid_monitor_files.diff Tweaked jobmanager to look for grid monitor state file in new location. diff
108__pr_mp.diff Fix to prevent MPI application crashes. diff (VDT ticket 2958) (Globus ticket 5533)
109__external_openssl.diff Use vendor OpenSSL instead of OpenSSL that comes with Globus. Also, fixes to build against OpenSSL 0.9.8. Previously, Globus only worked with OpenSSL 0.9.7. diff (Globus ticket 4617)
111__openssl_bootstrap.diff Makes sure patch 109__openssl_098.diff works. diff
112__pbs_multiple.diff diff
113__gridftp2.diff Allow the GridFTP client (especially globus-url-copy) to work with a GridFTP 2 server. (Currently the GridFTP server is using protocol version 1, not 2.) diff
114__gratia_fqan.diff Allow Gratia to get extra information when a job is submitted. Gratia uses this to extract the FQAN (The VOMS fully qualified attribute name) from the user's proxy, if it exists. diff
115__bugzilla_3036.diff Support TLSv1 in GSI GSSAPI library. diff (Globus ticket 3036)
117__job_status.diff diff
124__proxy_chain_length.diff Make the maximum proxy chain length 100 instead of 9. diff (VDT tickets 3584, 3710)
(Globus ticket 4994)
126__bug6348.diff Update Globus core from 4.34 to 4.35, fix a problem in globus_config.h diff (Globus ticket 6348)
127__gram_bugfixes.diff Lots of bug fixes for GRAM 2 and GRAM 4. diff (Globus ticket 6341)
(Globus ticket 6400)
(Globus ticket 6241)
(Globus ticket 6391)
(Globus ticket 6271)
(Globus ticket 6203)
128__bug4696.diff Fix grid-cert-info so that it works with certificate files with names ending with .0. diff (Globus ticket 4696)
129__fork_env.diff Expand the job manager's environment so that Condor-G's grid monitor can find some Perl modules. diff
130__bug6359.diff Fix crash in globus-url-copy diff (Globus ticket 6359)
131__bug6084.diff Make PBS understand C state diff (Globus ticket 6084)
132__bug6263.diff Make the Globus simple CA us SHA1 instead of MD5. diff (Globus ticket 6263)
133__bug6296.diff Fix endorsed directory. diff (Globus ticket 6296)
134__bug6437.diff Remove outdated file. It caused problems when making RPMs by adding a dependency on a Perl module that doesn't exist anymore. diff (Globus ticket 6437)
135__bug6502.diff Fix problem with GRAM auditing. diff (Globus ticket 6502)
136__bug6510.diff Fix threading problem in use of OpenSSL diff (Globus ticket 6510) (VDT ticket 4481)
137__persistence_manager.diff Fix problem with GRAM auditing that causes irrelevant warning. diff (Globus ticket 6617) (VDT ticket 4650)
138__gssapi_sym.diff Backport Globus 4.2 change to fix linking of GSSAPI. diff (Globus ticket 6415)

Apache

VDT 1.10.1 contains Apache 2.2.4. We build it with mod_ssl, mod_proxy, mod_rewrite, mod_python and mod_jk. We also apply patches as follows:

Name Description Diff
apache-GSI Patch Apache to be able to accept Globus's new and RFC style proxies. diff
apache-ctl Make Apache default to a config file in $VDT_LOCATION/apache/conf/httpd.conf. diff
apache-modpython Update mod_python to work with Apache 2.2. diff